- A widely used method of determining the order of bases in DNA.
sequencing, shotgun sequencing
- A chromosomal segment that branches off from the rest of the chromosome but is still connected by a thin filament or stalk.
- In genomic mapping, a series of contigs that are in the right order but not necessarily connected in one continuous stretch of sequence.
- The normal biological process whereby the two pieces of a chromosome pair are separated during meiosis and randomly distributed to the germ cells.
- The DNA strand of a gene that is complementary in sequence
to the template (antisense) strand, and identical to the transcribed
mRNA sequence (except that DNA contains T where RNA has
U). Gene sequences found in databases are always of the
sense strand, in the 5' to 3' direction.
- A process whereby the order of multiple sequenced DNA fragments is determined.
Sequence tagged site (STS)
- Short (200 to 500 base pairs) DNA sequence that has a single occurrence in the human genome and whose location and base sequence are known. Detectable by polymerase chain reaction, STSs are useful for localizing and orienting the mapping and sequence data reported from many different laboratories and serve as landmarks on the developing physical map of the human genome. Expressed sequence tags (ESTs) are STSs derived from cDNAs.
- Determination of the order of nucleotides (base sequences) in a DNA or RNA molecule or the order of amino acids in a protein.
- The instrumentation and procedures used to determine the order of nucleotides in DNA.
- The X or Y chromosome in human beings that determines the sex of an individual. Females have two X chromosomes in diploid cells; males have an X and a Y chromosome. The sex chromosomes comprise the 23rd chromosome pair in a karyotype.
- Traits or diseases associated with the X or Y chromosome; generally seen in males.
gene, mutation, sex chromosome
- Sequencing method that involves randomly sequenced cloned pieces of the genome, with no foreknowledge of where the piece originally came from. This can be contrasted with "directed" strategies, in which pieces of DNA from known chromosomal locations are sequenced. Because there are advantages to both strategies, researchers use both random (or shotgun) and directed strategies in combination to sequence the human genome.
library, genomic library
Single nucleotide polymorphism (SNP)
- DNA sequence variations that occur when a single nucleotide (A, T, C, or G) in the genome sequence is altered.
mutation, polymorphism, single-gene disorder
- Hereditary disorder caused by a mutant allele of a single gene (e.g., Duchenne muscular dystrophy, retinoblastoma, sickle cell disease).
- Any cell in the body except gametes and their precursors.
Somatic cell gene therapy
- Incorporating new genetic material into cells for therapeutic purposes. The new genetic material cannot be passed to offspring.
Somatic cell genetic mutation
- A change in the genetic structure that is neither inherited nor passed to offspring. Also called acquired mutations.
germ line genetic mutation
- Transfer by absorption of DNA fragments separated in electrophoretic gels to membrane filters for detection of specific base sequences by radio-labeled complementary probes.
Spectral karyotype (SKY)
- A graphic of all an organism's chromosomes, each labeled with a different color. Useful for identifying chromosomal abnormalities.
- Location in the DNA sequence where RNA removes the noncoding areas to form a continuous gene transcript for translation into a protein.
- Cancer that occurs randomly and is not inherited from parents. Caused by DNA changes in one cell that grows and divides, spreading throughout the body.
- Undifferentiated, primitive cells in the bone marrow that have the ability both to multiply and to differentiate into specific blood cells.
- The effort to determine the 3D structures of large numbers of proteins using both experimental techniques and computer simulation
- In genetics, a type of mutation due to replacement of one nucleotide in a DNA sequence by another nucleotide or replacement of one amino acid in a protein by another amino acid.
- A gene that can suppress the action of another gene.
- The group or recognizable pattern of symptoms or abnormalities that indicate a particular trait or disease.
- Genetically identical members of the same species.
- Genes occurring in the same order on chromosomes of different species.
linkage, conserved sequence